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  • Top cofit genes for PP_0066 from Pseudomonas putida KT2440

    Ribosomal RNA small subunit methyltransferase B
    SEED: Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-)
    KEGG: ribosomal RNA small subunit methyltransferase B

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_1798 Outer membrane efflux protein no 0.90
    2 PP_1627 conserved protein of unknown function no 0.89
    3 PP_3627 conserved protein of unknown function no 0.83
    4 PP_0540 conserved inner membrane protein 0.43 0.83
    5 PP_1774 conserved exported protein of unknown function no 0.80
    6 PP_2148 transcription-repair coupling factor 0.76 0.79
    7 PP_5283 periplasmic dipeptide transport protein 0.77 0.77
    8 PP_1803 UDP-sugar epimerase 0.26 0.76
    9 PP_1777 phosphomannomutase 0.76 0.76
    10 PP_1871 Protease HtpX 0.43 0.74
    11 PP_1797 HlyD family secretion protein no 0.74
    12 PP_0789 N-acetyl-anhydromuramyl-L-alanine-amidase 0.91 0.72
    13 PP_1807 2-dehydro-3-deoxyphosphooctonate aldolase no 0.71
    14 PP_0405 conserved protein of unknown function 0.42 0.69
    15 PP_1663 conserved exported protein of unknown function 0.60 0.69
    16 PP_1204 putative Lipoprotein 0.56 0.69
    17 PP_1800 Oxidoreductase Rmd no 0.68
    18 PP_5284 UPF0758 protein PP_5284 0.46 0.68
    19 PP_1776 Mannose-6-phosphate isomerase/mannose-1-phosphate guanylyltransferase no 0.68
    20 PP_1523 conserved protein of unknown function no 0.67

    Or look for negative cofitness