Top cofit genes for PP_0057 from Pseudomonas putida KT2440

major facilitator family transporter
SEED: Permeases of the major facilitator superfamily

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0056		choline dehydrogenase	0.74	0.71
2	PP_0055		transcriptional regulator	0.22	0.70
3	PP_4667		methylmalonate-semialdehyde dehydrogenase	0.32	0.45
4	PP_4668		Transcriptional regulator, LysR family	0.30	0.36
5	PP_4666		3-hydroxyisobutyrate dehydrogenase	0.34	0.35
6	PP_0597		methylmalonate-semialdehyde dehydrogenase	0.69	0.33
7	PP_4628		conserved protein of unknown function	0.38	0.32
8	PP_2335		methylcitrate synthase	0.16	0.30
9	PP_2334		2-methylisocitrate lyase	0.29	0.26
10	PP_3074		D-beta-hydroxybutyrate permease	no	0.23
11	PP_0595		Transcriptional regulator, LysR family	0.38	0.22
12	PP_0486		Transcriptional regulator, GntR family	no	0.20
13	PP_2132		Universal stress protein	0.57	0.20
14	PP_1655		23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	0.32	0.20
15	PP_3491		Enoly-coenzyme A hydratase/isomerase family protein	0.23	0.20
16	PP_5227		diaminopimelate decarboxylase	0.66	0.20
17	PP_2868		Transcriptional regulator, Cro/CI family	0.33	0.20
18	PP_3123		acetoacetyl CoA-transferase (subunit B)	no	0.19
19	PP_5085		malic enzyme B	0.34	0.19
20	PP_1683		Transcriptional regulator, MarR family	0.32	0.19

Or look for negative cofitness