Top cofit genes for PP_0056 from Pseudomonas putida KT2440

choline dehydrogenase
SEED: Choline dehydrogenase (EC 1.1.99.1)
KEGG: choline dehydrogenase

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PP_0055		transcriptional regulator	0.44	0.88
2	PP_0057		major facilitator family transporter	0.74	0.71
3	PP_0597		methylmalonate-semialdehyde dehydrogenase	0.31	0.44
4	PP_4667		methylmalonate-semialdehyde dehydrogenase	0.14	0.39
5	PP_1984		Transcriptional regulator, LysR family	no	0.37
6	PP_4668		Transcriptional regulator, LysR family	0.79	0.34
7	PP_0595		Transcriptional regulator, LysR family	0.26	0.32
8	PP_5085		malic enzyme B	no	0.31
9	PP_4565		Isocitrate dehydrogenase kinase/phosphatase	0.73	0.27
10	PP_2868		Transcriptional regulator, Cro/CI family	no	0.27
11	PP_2132		Universal stress protein	0.20	0.27
12	PP_4666		3-hydroxyisobutyrate dehydrogenase	0.71	0.26
13	PP_3491		Enoly-coenzyme A hydratase/isomerase family protein	0.59	0.25
14	PP_0596		Omega-amino acid--pyruvate aminotransferase	0.58	0.25
15	PP_4628		conserved protein of unknown function	no	0.23
16	PP_0248		Probable alpha-L-glutamate ligase	0.45	0.23
17	PP_0356		malate synthase G	0.76	0.22
18	PP_1826		Hydrolase, isochorismatase family	no	0.22
19	PP_4699		3-methyl-2-oxobutanoate hydroxymethyltransferase	0.36	0.20
20	PP_2433		conserved protein of unknown function	no	0.20

Or look for negative cofitness