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Cofit
Protein
Homologs
Top cofit genes for PP_0040 from
Pseudomonas putida KT2440
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PP
_5738
conserved protein of unknown function
no
0.21
2
PP
_2279
Head-to-tail joining protein
no
0.16
3
PP
_5614
protein of unknown function
no
0.15
4
PP
_1216
Holliday junction ATP-dependent DNA helicase RuvA
no
0.15
5
PP
_1208
conserved protein of unknown function, SlyX family
no
0.14
6
PP
_5374
Choline/carnitine/betaine transporter family protein
no
0.14
7
PP
_1920
conserved protein of unknown function
no
0.13
8
PP
_5352
DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex
no
0.13
9
PP
_5309
oxidative and nitrosative stress transcriptional dual regulator
no
0.13
10
PP
_2000
amidophosphoribosyl transferase
no
0.13
11
PP
_0408
conserved exported protein of unknown function
no
0.13
12
PP
_2147
conserved exported protein of unknown function
no
0.13
13
PP
_3833
Response regulator
no
0.13
14
PP
_0218
Sensory box protein
no
0.12
15
PP
_3989
DNA-cytosine methyltransferase
no
0.12
16
PP
_4375
flagellar chaperone, inhibits premature FliC assembly
no
0.12
17
PP
_1577
Phage tail tape meausure protein, lambda family
no
0.12
18
PP
_3803
putative Cation ABC transporter, permease protein
no
0.12
19
PP
_0036
putative transcriptional regulator
no
0.12
20
PP
_4382
Peptidoglycan hydrolase FlgJ
no
0.12
Or look for
negative cofitness