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  • Top cofit genes for PP_0002 from Pseudomonas putida KT2440

    probable chromosome partition protein
    SEED: Chromosome (plasmid) partitioning protein ParA
    KEGG: chromosome partitioning protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PP_5352 DNA-dependent ATPase I and helicase II, nucleotide Excision Repair Complex 0.82 0.47
    2 PP_4131 NADH-quinone oxidoreductase subunit N 0.62 0.42
    3 PP_4004 DNA translocase FtsK 0.57 0.41
    4 PP_1217 Holliday junction ATP-dependent DNA helicase RuvB 0.63 0.40
    5 PP_0123 DNA polymerase I, 5 0.62 0.40
    6 PP_4121 NADH-quinone oxidoreductase subunit C/D 0.55 0.39
    7 PP_4058 1,4-alpha-glucan branching enzyme 0.69 0.39
    8 PP_4124 NADH-quinone oxidoreductase subunit G 0.60 0.38
    9 PP_4120 NADH-quinone oxidoreductase subunit B 0.55 0.37
    10 PP_1216 Holliday junction ATP-dependent DNA helicase RuvA 0.71 0.37
    11 PP_4129 NADH:ubiquinone oxidoreductase, membrane subunit L 0.33 0.37
    12 PP_5310 junction-specific ATP-dependent DNA helicase 0.65 0.36
    13 PP_5230 Tyrosine recombinase XerC 0.72 0.36
    14 PP_2302 DNA-binding, ATP-dependent protease 0.65 0.36
    15 PP_4130 NADH:ubiquinone oxidoreductase, membrane subunit M 0.82 0.36
    16 PP_4988 signal transduction histidine kinase CheA/CheY-like receiver no 0.35
    17 PP_4880 exoribonuclease R 0.41 0.33
    18 PP_1318 Cytochrome b 0.62 0.33
    19 PP_4546 ATP-dependent helicase HrpA no 0.33
    20 PP_1629 Protein RecA 0.79 0.33

    Or look for negative cofitness