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Cofit
Protein
Homologs
Top cofit genes for PFR28_04524 from
Pseudomonas sp. RS175
hypothetical protein
SEED: putative membrane protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFR28
_02147
4-alpha-glucanotransferase
no
0.49
2
PFR28
_01722
Sensor histidine kinase RcsC
0.28
0.45
3
PFR28
_01318
Glucosamine kinase
no
0.44
4
PFR28
_04244
hypothetical protein
0.75
0.42
5
PFR28
_00694
Beta-barrel assembly-enhancing protease
0.50
0.41
6
PFR28
_00074
Chaperone protein DnaJ
0.40
0.41
7
PFR28
_00191
Serine endoprotease DegS
0.54
0.40
8
PFR28
_01317
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2
0.50
0.39
9
PFR28
_04634
Alginate biosynthesis transcriptional regulatory protein AlgB
no
0.38
10
PFR28
_04481
hypothetical protein
no
0.37
11
PFR28
_04096
3-methylmercaptopropionyl-CoA dehydrogenase
0.35
0.36
12
PFR28
_02194
Multidrug resistance protein MdtB
no
0.35
13
PFR28
_04953
Maltodextrin phosphorylase
no
0.35
14
PFR28
_04869
Osmolarity sensor protein EnvZ
0.65
0.35
15
PFR28
_01700
hypothetical protein
no
0.35
16
PFR28
_04998
ATP-dependent protease ATPase subunit HslU
0.53
0.34
17
PFR28
_03679
Carbonic anhydrase 2
0.25
0.33
18
PFR28
_01983
Coniferyl aldehyde dehydrogenase
no
0.33
19
PFR28
_03864
D-alanyl-D-alanine carboxypeptidase DacC
0.45
0.33
20
PFR28
_01576
hypothetical protein
no
0.32
Or look for
negative cofitness