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  • Top cofit genes for PFR28_03973 from Pseudomonas sp. RS175

    Inner membrane transport protein YajR
    SEED: Putative transport protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PFR28_01392 Sensor histidine kinase RcsC 0.39 0.52
    2 PFR28_01720 Chemotaxis protein methyltransferase no 0.49
    3 PFR28_03298 Nucleoid occlusion factor SlmA 0.54 0.49
    4 PFR28_00692 Sigma factor AlgU regulatory protein MucB 0.57 0.46
    5 PFR28_03389 Copper resistance protein A 0.46 0.41
    6 PFR28_03390 Copper resistance protein B no 0.39
    7 PFR28_02113 Blue-light-activated protein no 0.38
    8 PFR28_00633 HTH-type transcriptional regulator TtgR 0.67 0.37
    9 PFR28_04633 Alginate biosynthesis sensor protein KinB 0.66 0.35
    10 PFR28_04031 Anhydro-N-acetylmuramic acid kinase 0.71 0.34
    11 PFR28_03611 HTH-type transcriptional regulator CdhR no 0.34
    12 PFR28_04060 N-acetylmuramate/N-acetylglucosamine kinase 0.70 0.33
    13 PFR28_03483 hypothetical protein no 0.33
    14 PFR28_04560 D-inositol-3-phosphate glycosyltransferase no 0.32
    15 PFR28_04919 hypothetical protein no 0.32
    16 PFR28_00138 Vitamin B12 transport ATP-binding protein BacA 0.64 0.31
    17 PFR28_02826 hypothetical protein no 0.31
    18 PFR28_04347 hypothetical protein 0.60 0.31
    19 PFR28_01119 Beta-hexosaminidase 0.71 0.31
    20 PFR28_00598 hypothetical protein no 0.30

    Or look for negative cofitness