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Cofit
Protein
Homologs
Top cofit genes for PFR28_03629 from
Pseudomonas sp. RS175
hypothetical protein
SEED: Restriction endonuclease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFR28
_01370
hypothetical protein
0.37
0.46
2
PFR28
_00791
Outer membrane protein assembly factor BamA
0.26
0.46
3
PFR28
_01143
tRNA-dihydrouridine(20/20a) synthase
0.20
0.42
4
PFR28
_01273
hypothetical protein
no
0.39
5
PFR28
_04411
Periplasmic dipeptide transport protein
no
0.38
6
PFR28
_00960
hypothetical protein
0.35
0.38
7
PFR28
_01171
hypothetical protein
no
0.37
8
PFR28
_00896
hypothetical protein
no
0.37
9
PFR28
_00332
Thiol:disulfide interchange protein DsbC
0.64
0.37
10
PFR28
_04736
hypothetical protein
no
0.37
11
PFR28
_04263
hypothetical protein
no
0.37
12
PFR28
_02657
Methyl-accepting chemotaxis protein McpA
no
0.35
13
PFR28
_03263
Sensor histidine kinase ResE
0.35
0.34
14
PFR28
_02825
HTH-type transcriptional activator CmpR
no
0.34
15
PFR28
_04539
Major cardiolipin synthase ClsA
no
0.34
16
PFR28
_00014
3-hydroxyisobutyrate dehydrogenase
no
0.34
17
PFR28
_00424
'5'-nucleotidase SurE' transl_table=11
no
0.34
18
PFR28
_00179
Intermembrane phospholipid transport system ATP-binding protein MlaF
0.56
0.34
19
PFR28
_04521
HTH-type transcriptional regulator HexR
0.47
0.34
20
PFR28
_01047
Nitrate reductase
no
0.34
Or look for
negative cofitness