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Cofit
Protein
Homologs
Top cofit genes for PFR28_02590 from
Pseudomonas sp. RS175
hypothetical protein
SEED: membrane protein, putative
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFR28
_00053
HTH-type transcriptional regulator GltC
no
0.32
2
PFR28
_02500
ATP-dependent Clp protease proteolytic subunit
no
0.31
3
PFR28
_02880
Linear gramicidin synthase subunit D
no
0.29
4
PFR28
_04780
hypothetical protein
no
0.29
5
PFR28
_01081
hypothetical protein
no
0.29
6
PFR28
_03932
hypothetical protein
no
0.28
7
PFR28
_02053
putative GMC-type oxidoreductase
no
0.28
8
PFR28
_03362
hypothetical protein
no
0.28
9
PFR28
_03215
Sodium-lithium/proton antiporter
no
0.28
10
PFR28
_05210
hypothetical protein
no
0.27
11
PFR28
_01857
Nitrite reductase (NADH) small subunit
no
0.27
12
PFR28
_03509
NADH pyrophosphatase
no
0.25
13
PFR28
_02526
hypothetical protein
no
0.25
14
PFR28
_03560
Mannuronan C5-epimerase
0.16
0.25
15
PFR28
_02882
D-alanine--D-alanyl carrier protein ligase
no
0.25
16
PFR28
_01450
hypothetical protein
no
0.24
17
PFR28
_01051
Nitrate transporter
no
0.24
18
PFR28
_02539
Protein FecR
no
0.24
19
PFR28
_02866
L-ornithine N(5)-monooxygenase
0.53
0.24
20
PFR28
_03489
Beta-xylosidase
no
0.23
Or look for
negative cofitness