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  • Top cofit genes for PFR28_02150 from Pseudomonas sp. RS175

    Glycogen operon protein GlgX
    SEED: Glycogen debranching enzyme (EC 3.2.1.-)
    KEGG: glycogen operon protein GlgX

    Rank Hit Name Description Conserved? Cofitness  
    1 PFR28_04953 Maltodextrin phosphorylase 0.92 0.84
    2 PFR28_02147 4-alpha-glucanotransferase 0.85 0.69
    3 PFR28_04448 Protein phosphatase PrpC no 0.62
    4 PFR28_02410 hypothetical protein 0.33 0.58
    5 PFR28_01317 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2 0.81 0.58
    6 PFR28_00690 RNA polymerase sigma-H factor 0.62 0.54
    7 PFR28_03856 LPS-assembly lipoprotein LptE no 0.54
    8 PFR28_00999 Glutathione-regulated potassium-efflux system protein KefC 0.27 0.54
    9 PFR28_00562 Glucokinase no 0.53
    10 PFR28_00191 Serine endoprotease DegS 0.72 0.52
    11 PFR28_04316 Aminomethyltransferase 0.18 0.52
    12 PFR28_03603 Stringent starvation protein A no 0.51
    13 PFR28_02194 Multidrug resistance protein MdtB 0.48 0.51
    14 PFR28_04634 Alginate biosynthesis transcriptional regulatory protein AlgB 0.76 0.49
    15 PFR28_03784 Energy-dependent translational throttle protein EttA 0.76 0.49
    16 PFR28_01319 1,4-alpha-glucan branching enzyme GlgB 0.87 0.49
    17 PFR28_04547 hypothetical protein no 0.48
    18 PFR28_04998 ATP-dependent protease ATPase subunit HslU 0.60 0.48
    19 PFR28_02145 Glycogen synthase 0.96 0.46
    20 PFR28_01838 Vanillin dehydrogenase no 0.46

    Or look for negative cofitness