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  • Top cofit genes for PFR28_02027 from Pseudomonas sp. RS175

    HTH-type transcriptional regulator DmlR
    SEED: LysR family transcriptional regulatory protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PFR28_01380 hypothetical protein no 0.59
    2 PFR28_00332 Thiol:disulfide interchange protein DsbC no 0.55
    3 PFR28_03895 hypothetical protein no 0.54
    4 PFR28_03667 hypothetical protein no 0.52
    5 PFR28_03243 Virulence sensor histidine kinase PhoQ no 0.52
    6 PFR28_02250 hypothetical protein no 0.50
    7 PFR28_00925 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase no 0.50
    8 PFR28_05076 hypothetical protein no 0.49
    9 PFR28_03245 hypothetical protein no 0.48
    10 PFR28_00299 hypothetical protein no 0.48
    11 PFR28_05074 hypothetical protein no 0.48
    12 PFR28_03897 Type I restriction enzyme EcoKI M protein no 0.47
    13 PFR28_00791 Outer membrane protein assembly factor BamA no 0.47
    14 PFR28_03244 Transcriptional regulatory protein PhoP no 0.46
    15 PFR28_01161 hypothetical protein no 0.45
    16 PFR28_01195 hypothetical protein no 0.45
    17 PFR28_05020 hypothetical protein no 0.45
    18 PFR28_00025 NADPH:quinone oxidoreductase MdaB 0.50 0.44
    19 PFR28_03898 hypothetical protein no 0.44
    20 PFR28_04138 hypothetical protein no 0.44

    Or look for negative cofitness