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Cofit
Protein
Homologs
Top cofit genes for PFR28_01895 from
Pseudomonas sp. RS175
Porin-like protein NicP
SEED: Tricarboxylate porin OpdH
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFR28
_01380
hypothetical protein
no
0.37
2
PFR28
_03245
hypothetical protein
0.35
0.37
3
PFR28
_00791
Outer membrane protein assembly factor BamA
0.20
0.36
4
PFR28
_00332
Thiol:disulfide interchange protein DsbC
0.15
0.33
5
PFR28
_03243
Virulence sensor histidine kinase PhoQ
no
0.31
6
PFR28
_03219
hypothetical protein
no
0.31
7
PFR28
_01161
hypothetical protein
no
0.31
8
PFR28
_01370
hypothetical protein
no
0.30
9
PFR28
_05074
hypothetical protein
no
0.30
10
PFR28
_01163
hypothetical protein
no
0.29
11
PFR28
_04263
hypothetical protein
no
0.29
12
PFR28
_01993
Type I secretion system membrane fusion protein PrsE
no
0.29
13
PFR28
_05076
hypothetical protein
no
0.28
14
PFR28
_00296
Cytoskeleton protein RodZ
no
0.28
15
PFR28
_04286
hypothetical protein
no
0.28
16
PFR28
_00604
hypothetical protein
0.42
0.27
17
PFR28
_02027
HTH-type transcriptional regulator DmlR
no
0.27
18
PFR28
_03090
hypothetical protein
no
0.27
19
PFR28
_01013
putative protein YcbX
0.21
0.27
20
PFR28
_01195
hypothetical protein
no
0.27
Or look for
negative cofitness