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Cofit
Protein
Homologs
Top cofit genes for PFR28_01424 from
Pseudomonas sp. RS175
Cyclic di-GMP phosphodiesterase
SEED: HDIG domain protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFR28
_01857
Nitrite reductase (NADH) small subunit
no
0.39
2
PFR28
_01692
HTH-type transcriptional regulator DmlR
no
0.37
3
PFR28
_04092
hypothetical protein
no
0.37
4
PFR28
_03249
Transcriptional regulatory protein RstA
no
0.35
5
PFR28
_01165
hypothetical protein
no
0.33
6
PFR28
_01097
Aerotaxis receptor
no
0.32
7
PFR28
_03065
Transcriptional regulatory protein OmpR
no
0.31
8
PFR28
_04604
hypothetical protein
no
0.31
9
PFR28
_03043
hypothetical protein
no
0.31
10
PFR28
_04143
hypothetical protein
no
0.31
11
PFR28
_01462
Argininosuccinate lyase
no
0.30
12
PFR28
_03892
Protein MtfA
no
0.29
13
PFR28
_02064
hypothetical protein
no
0.29
14
PFR28
_03645
Renalase
0.12
0.29
15
PFR28
_03528
Cytosol aminopeptidase
no
0.29
16
PFR28
_02550
hypothetical protein
no
0.29
17
PFR28
_02692
hypothetical protein
no
0.29
18
PFR28
_03854
hypothetical protein
no
0.29
19
PFR28
_04682
hypothetical protein
no
0.29
20
PFR28
_02300
hypothetical protein
no
0.29
Or look for
negative cofitness