Top cofit genes for PFR28_01260 from Pseudomonas sp. RS175

Acyl-CoA dehydrogenase
SEED: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PFR28_01259		Methylmalonyl-CoA carboxyltransferase 12S subunit	0.99	0.92
2	PFR28_01257		Acetyl-/propionyl-coenzyme A carboxylase alpha chain	0.99	0.89
3	PFR28_01258		1,4-dihydroxy-2-naphthoyl-CoA synthase	0.94	0.72
4	PFR28_04068		hypothetical protein	0.50	0.69
5	PFR28_04069		hypothetical protein	0.50	0.69
6	PFR28_04070		hypothetical protein	0.50	0.67
7	PFR28_02446		2-oxoisovalerate dehydrogenase subunit beta	0.98	0.67
8	PFR28_02445		2-oxoisovalerate dehydrogenase subunit alpha	0.98	0.64
9	PFR28_02447		Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex	0.77	0.61
10	PFR28_03779		hypothetical protein	0.38	0.61
11	PFR28_01265		(R)-benzylsuccinyl-CoA dehydrogenase	0.34	0.61
12	PFR28_00796		hypothetical protein	no	0.60
13	PFR28_03618		hypothetical protein	0.36	0.59
14	PFR28_00897		hypothetical protein	no	0.59
15	PFR28_04965		Urocanate hydratase	0.23	0.59
16	PFR28_01233		hypothetical protein	no	0.57
17	PFR28_01576		hypothetical protein	0.59	0.57
18	PFR28_00208		Dihydromonapterin reductase	0.28	0.57
19	PFR28_00538		hypothetical protein	0.99	0.56
20	PFR28_03746		Chaperone protein ClpB	0.43	0.56

Or look for negative cofitness