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Cofit
Top cofit genes for PFLU_RS31830 from
Pseudomonas fluorescens SBW25
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS17585
type IV secretion protein Rhs
no
0.71
2
PFLU
_RS26250
ferredoxin--NADP reductase
no
0.65
3
PFLU
_RS16535
methyl-accepting chemotaxis protein
no
0.64
4
PFLU
_RS21480
two-component sensor histidine kinase
no
0.63
5
PFLU
_RS02085
hotdog family protein
no
0.62
6
PFLU
_RS10965
transporter substrate-binding domain-containing protein
no
0.59
7
PFLU
_RS12210
hypothetical protein
no
0.59
8
PFLU
_RS08700
MFS transporter
no
0.59
9
PFLU
_RS00540
acetyl-CoA hydrolase/transferase family protein
no
0.59
10
PFLU
_RS01145
efflux RND transporter periplasmic adaptor subunit
no
0.58
11
PFLU
_RS07730
glycerophosphodiester phosphodiesterase
no
0.58
12
PFLU
_RS18425
META domain-containing protein
no
0.58
13
PFLU
_RS31545
LysR family transcriptional regulator
no
0.56
14
PFLU
_RS00770
hypothetical protein
no
0.56
15
PFLU
_RS01365
formate dehydrogenase accessory sulfurtransferase FdhD
no
0.56
16
PFLU
_RS20785
LysR family transcriptional regulator
no
0.56
17
PFLU
_RS08450
LysR family transcriptional regulator
no
0.55
18
PFLU
_RS20995
3-dehydroquinate dehydratase
no
0.55
19
PFLU
_RS14140
hypothetical protein
no
0.55
20
PFLU
_RS04935
cyclic pyranopterin monophosphate synthase MoaC
no
0.55
Or look for
negative cofitness