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Cofit
Top cofit genes for PFLU_RS31530 from
Pseudomonas fluorescens SBW25
transposase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS08220
K(+)-transporting ATPase subunit F
no
0.59
2
PFLU
_RS16075
aldehyde dehydrogenase
no
0.59
3
PFLU
_RS01155
efflux RND transporter permease subunit
no
0.58
4
PFLU
_RS17770
multidrug effflux MFS transporter
no
0.56
5
PFLU
_RS20350
nucleoside hydrolase
no
0.56
6
PFLU
_RS31095
hypothetical protein
no
0.55
7
PFLU
_RS15795
hypothetical protein
no
0.54
8
PFLU
_RS14485
molybdate ABC transporter substrate-binding protein
no
0.54
9
PFLU
_RS19920
prepilin-type N-terminal cleavage/methylation domain-containing protein
no
0.54
10
PFLU
_RS13000
methionine synthase
no
0.53
11
PFLU
_RS02310
LPS kinase
no
0.53
12
PFLU
_RS09940
LysR family transcriptional regulator
no
0.52
13
PFLU
_RS10960
transcriptional regulator LrhA
no
0.52
14
PFLU
_RS17010
universal stress protein A
no
0.52
15
PFLU
_RS24155
putative 2-dehydropantoate 2-reductase
no
0.52
16
PFLU
_RS26255
LuxR family transcriptional regulator
no
0.51
17
PFLU
_RS22425
YbaB/EbfC family nucleoid-associated protein
no
0.51
18
PFLU
_RS16535
methyl-accepting chemotaxis protein
no
0.51
19
PFLU
_RS13250
sugar kinase
no
0.50
20
PFLU
_RS06260
succinyldiaminopimelate transaminase
no
0.50
Or look for
negative cofitness