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Cofit
Top cofit genes for PFLU_RS30865 from
Pseudomonas fluorescens SBW25
transposase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS31110
recombinase family protein
no
0.64
2
PFLU
_RS13700
methyl-accepting chemotaxis protein
no
0.63
3
PFLU
_RS23365
ribonucleotide-diphosphate reductase subunit beta
no
0.62
4
PFLU
_RS14280
phytanoyl-CoA dioxygenase
no
0.61
5
PFLU
_RS20190
hypothetical protein
no
0.58
6
PFLU
_RS07315
MFS transporter
no
0.57
7
PFLU
_RS10760
helix-turn-helix transcriptional regulator
no
0.56
8
PFLU
_RS29825
asparaginase
no
0.56
9
PFLU
_RS16300
hypothetical protein
no
0.55
10
PFLU
_RS15215
cytochrome b
no
0.54
11
PFLU
_RS20235
tail fiber assembly protein
no
0.54
12
PFLU
_RS04270
AEC family transporter
no
0.54
13
PFLU
_RS30405
hypothetical protein
no
0.53
14
PFLU
_RS18695
arylamine N-acetyltransferase
no
0.53
15
PFLU
_RS12100
AraC family transcriptional regulator
no
0.53
16
PFLU
_RS26265
cytochrome d ubiquinol oxidase subunit II
no
0.53
17
PFLU
_RS31760
AraC family transcriptional regulator
no
0.53
18
PFLU
_RS01015
PhnD/SsuA/transferrin family substrate-binding protein
no
0.52
19
PFLU
_RS08240
sensor histidine kinase KdpD
no
0.52
20
PFLU
_RS06045
purine-binding chemotaxis protein CheW
no
0.52
Or look for
negative cofitness