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Cofit
Protein
Homologs
Top cofit genes for PFLU_RS29705 from
Pseudomonas fluorescens SBW25
rubredoxin
SEED: Rubredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS24020
RDD family protein
0.85
0.72
2
PFLU
_RS25645
acetolactate synthase small subunit
no
0.70
3
PFLU
_RS20610
tRNA-dihydrouridine synthase family protein
no
0.70
4
PFLU
_RS20515
amidophosphoribosyltransferase
no
0.69
5
PFLU
_RS03015
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH
no
0.68
6
PFLU
_RS08400
5'-nucleotidase
0.32
0.68
7
PFLU
_RS00430
N-acetylmuramoyl-L-alanine amidase
0.37
0.68
8
PFLU
_RS01610
imidazole glycerol phosphate synthase subunit HisH
no
0.68
9
PFLU
_RS22260
beta-ketoacyl-ACP synthase III
no
0.67
10
PFLU
_RS29265
diaminopimelate decarboxylase
0.41
0.66
11
PFLU
_RS25590
exodeoxyribonuclease V subunit beta
no
0.65
12
PFLU
_RS29350
xanthine phosphoribosyltransferase
0.27
0.65
13
PFLU
_RS22535
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
0.53
0.65
14
PFLU
_RS08535
response regulator
0.29
0.64
15
PFLU
_RS00175
tryptophan synthase subunit alpha
no
0.64
16
PFLU
_RS28945
Xaa-Pro aminopeptidase
0.49
0.63
17
PFLU
_RS24545
threonine synthase
no
0.63
18
PFLU
_RS25585
exodeoxyribonuclease V subunit alpha
no
0.63
19
PFLU
_RS24550
homoserine dehydrogenase
no
0.62
20
PFLU
_RS22595
OmpA family protein
0.62
0.62
Or look for
negative cofitness