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Cofit
Protein
Homologs
Top cofit genes for PFLU_RS28815 from
Pseudomonas fluorescens SBW25
transporter
SEED: Organosulfonate utilization protein SsuF
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS09680
TIGR03759 family integrating conjugative element protein
no
0.71
2
PFLU
_RS22185
hypothetical protein
no
0.71
3
PFLU
_RS16120
TetR/AcrR family transcriptional regulator
0.27
0.70
4
PFLU
_RS13555
NAD(+) diphosphatase
0.10
0.67
5
PFLU
_RS11805
DoxX family protein
no
0.67
6
PFLU
_RS19830
type VI secretion system tube protein Hcp
no
0.67
7
PFLU
_RS14050
hypothetical protein
no
0.65
8
PFLU
_RS14805
4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF
no
0.64
9
PFLU
_RS21570
exonuclease
no
0.64
10
PFLU
_RS03945
type II secretion system F family protein
no
0.63
11
PFLU
_RS02795
hypothetical protein
no
0.62
12
PFLU
_RS31545
LysR family transcriptional regulator
no
0.61
13
PFLU
_RS22220
LysR family transcriptional regulator
0.26
0.61
14
PFLU
_RS13500
CAP domain-containing protein
no
0.60
15
PFLU
_RS04935
cyclic pyranopterin monophosphate synthase MoaC
0.40
0.60
16
PFLU
_RS13100
YafY family transcriptional regulator
0.24
0.60
17
PFLU
_RS28950
YecA family protein
0.26
0.60
18
PFLU
_RS16220
GlxA family transcriptional regulator
no
0.59
19
PFLU
_RS08220
K(+)-transporting ATPase subunit F
no
0.59
20
PFLU
_RS19525
sterol desaturase family protein
no
0.58
Or look for
negative cofitness