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Cofit
Protein
Homologs
Top cofit genes for PFLU_RS19300 from
Pseudomonas fluorescens SBW25
TRAP transporter small permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS01670
protein-export chaperone SecB
0.30
0.81
2
PFLU
_RS19290
SMP-30/gluconolactonase/LRE family protein
0.93
0.75
3
PFLU
_RS19280
OprD family porin
0.76
0.73
4
PFLU
_RS22940
IclR family transcriptional regulator
0.31
0.71
5
PFLU
_RS00750
poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD
no
0.69
6
PFLU
_RS13000
methionine synthase
no
0.66
7
PFLU
_RS26700
LrgB family protein
no
0.62
8
PFLU
_RS23310
arginine/ornithine succinyltransferase subunit alpha
0.40
0.61
9
PFLU
_RS31185
hypothetical protein
no
0.60
10
PFLU
_RS00150
2-dehydro-3-deoxygalactonokinase
0.66
0.59
11
PFLU
_RS13045
AAA domain-containing protein
no
0.56
12
PFLU
_RS12615
oxidoreductase
no
0.56
13
PFLU
_RS24025
quinolinate synthase NadA
0.35
0.53
14
PFLU
_RS19285
NAD(P)-dependent oxidoreductase
0.95
0.52
15
PFLU
_RS05915
diacylglycerol kinase
no
0.51
16
PFLU
_RS12610
inositol 2-dehydrogenase
no
0.51
17
PFLU
_RS03970
carboxylating nicotinate-nucleotide diphosphorylase
no
0.51
18
PFLU
_RS28965
5-formyltetrahydrofolate cyclo-ligase
no
0.50
19
PFLU
_RS24555
thioredoxin fold domain-containing protein
0.19
0.50
20
PFLU
_RS31100
preprotein translocase subunit SecG
no
0.50
Or look for
negative cofitness