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Cofit
Protein
Homologs
Top cofit genes for PFLU_RS16945 from
Pseudomonas fluorescens SBW25
MmgE/PrpD family protein
SEED: MmgE/PrpD family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS25390
hypothetical protein
no
0.63
2
PFLU
_RS15665
multidrug efflux RND transporter permease subunit
no
0.62
3
PFLU
_RS16970
hypothetical protein
no
0.62
4
PFLU
_RS04890
right-handed parallel beta-helix repeat-containing protein
no
0.61
5
PFLU
_RS11320
glucose/quinate/shikimate family membrane-bound PQQ-dependent dehydrogenase
0.27
0.59
6
PFLU
_RS16840
DUF2834 domain-containing protein
no
0.56
7
PFLU
_RS04880
mannuronate-specific alginate lyase
no
0.55
8
PFLU
_RS15080
APC family permease
no
0.55
9
PFLU
_RS06905
LemA family protein
no
0.54
10
PFLU
_RS23530
multidrug/biocide efflux PACE transporter
0.36
0.52
11
PFLU
_RS11910
filamentous hemagglutinin N-terminal domain-containing protein
no
0.51
12
PFLU
_RS19305
TRAP transporter large permease
no
0.51
13
PFLU
_RS09585
prolyl oligopeptidase family serine peptidase
no
0.51
14
PFLU
_RS08010
hypothetical protein
no
0.50
15
PFLU
_RS17330
PAS domain-containing sensor histidine kinase
no
0.50
16
PFLU
_RS14315
TonB-dependent receptor
no
0.50
17
PFLU
_RS12110
L-iditol 2-dehydrogenase
no
0.50
18
PFLU
_RS09210
ABC transporter ATP-binding protein
no
0.50
19
PFLU
_RS04520
hypothetical protein
no
0.50
20
PFLU
_RS02605
iron ABC transporter permease
no
0.50
Or look for
negative cofitness