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Cofit
Protein
Homologs
Top cofit genes for PFLU_RS15385 from
Pseudomonas fluorescens SBW25
helicase UvrD
SEED: UvrD/REP helicase family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS16500
DMT family transporter
no
0.56
2
PFLU
_RS05855
phage tail protein
no
0.56
3
PFLU
_RS29900
DNA helicase II
0.24
0.55
4
PFLU
_RS08130
flippase
no
0.53
5
PFLU
_RS24190
DUF853 family protein
no
0.53
6
PFLU
_RS13255
TIM barrel protein
no
0.52
7
PFLU
_RS29520
hypothetical protein
0.21
0.52
8
PFLU
_RS09410
hypothetical protein
no
0.51
9
PFLU
_RS08620
molybdenum cofactor guanylyltransferase MobA
no
0.50
10
PFLU
_RS19580
helix-turn-helix transcriptional regulator
no
0.50
11
PFLU
_RS26680
DNA-3-methyladenine glycosylase
0.28
0.49
12
PFLU
_RS11725
LacI family transcriptional regulator
0.24
0.49
13
PFLU
_RS01595
AsmA family protein
no
0.49
14
PFLU
_RS17280
hypothetical protein
no
0.49
15
PFLU
_RS16920
TRAP transporter large permease
no
0.48
16
PFLU
_RS25465
Lrp/AsnC family transcriptional regulator
no
0.48
17
PFLU
_RS07570
VWA domain-containing protein
no
0.48
18
PFLU
_RS02980
precorrin-8X methylmutase
no
0.48
19
PFLU
_RS14730
response regulator
no
0.47
20
PFLU
_RS11765
TetR/AcrR family transcriptional regulator
no
0.47
Or look for
negative cofitness