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Cofit
Protein
Homologs
Top cofit genes for PFLU_RS13535 from
Pseudomonas fluorescens SBW25
hypothetical protein
SEED: Ribosomal protein S3AE
Rank
Hit
Name
Description
Conserved?
Cofitness
1
PFLU
_RS12065
DMT family transporter
no
0.50
2
PFLU
_RS10870
LLM class flavin-dependent oxidoreductase
no
0.49
3
PFLU
_RS15835
His-Xaa-Ser system radical SAM maturase HxsB
no
0.49
4
PFLU
_RS11265
pectate lyase
no
0.47
5
PFLU
_RS21015
alpha/beta fold hydrolase
no
0.46
6
PFLU
_RS08740
phosphonate ABC transporter ATP-binding protein
no
0.45
7
PFLU
_RS11170
FadR family transcriptional regulator
no
0.44
8
PFLU
_RS11075
damage-inducible protein DinB
no
0.44
9
PFLU
_RS14205
nuclear transport factor 2 family protein
no
0.44
10
PFLU
_RS18185
SDR family oxidoreductase
no
0.43
11
PFLU
_RS18085
helix-turn-helix transcriptional regulator
no
0.43
12
PFLU
_RS12255
helix-turn-helix domain-containing protein
no
0.42
13
PFLU
_RS21070
LysR family transcriptional regulator
no
0.42
14
PFLU
_RS15465
TetR/AcrR family transcriptional regulator
no
0.41
15
PFLU
_RS25425
DUF1311 domain-containing protein
no
0.41
16
PFLU
_RS11725
LacI family transcriptional regulator
no
0.41
17
PFLU
_RS09760
AlpA family phage regulatory protein
no
0.41
18
PFLU
_RS31555
3-hydroxyacyl-CoA dehydrogenase
no
0.41
19
PFLU
_RS20475
hypothetical protein
no
0.41
20
PFLU
_RS06255
Na+/H+ antiporter
no
0.41
Or look for
negative cofitness