Top cofit genes for PFLU_RS09980 from Pseudomonas fluorescens SBW25

peptidase S41
SEED: Periplasmic protease
KEGG: carboxyl-terminal processing protease

Rank	Hit	Name	Description	Conserved?	Cofitness
1	PFLU_RS04650		ABC transporter substrate-binding protein	0.64	0.97
2	PFLU_RS26715		peptidase C13	0.58	0.97
3	PFLU_RS26770		DedA family protein	0.57	0.96
4	PFLU_RS24485		hypothetical protein	0.94	0.96
5	PFLU_RS02000		penicillin-binding protein 1A	0.70	0.96
6	PFLU_RS18920		outer membrane protein assembly factor	0.85	0.95
7	PFLU_RS14800		UDP-glucose/GDP-mannose dehydrogenase family protein	0.55	0.94
8	PFLU_RS18915		translocation/assembly module TamB	0.83	0.94
9	PFLU_RS07785		VacJ family lipoprotein	0.85	0.93
10	PFLU_RS14550		UTP--glucose-1-phosphate uridylyltransferase GalU	0.45	0.93
11	PFLU_RS02460		alpha/beta fold hydrolase	0.82	0.93
12	PFLU_RS28725		DUF2059 domain-containing protein	0.67	0.93
13	PFLU_RS24050		tol-pal system protein YbgF	0.64	0.93
14	PFLU_RS23125		HAMP domain-containing protein	0.70	0.92
15	PFLU_RS04440		outer membrane lipid asymmetry maintenance protein MlaD	0.74	0.92
16	PFLU_RS27305		anhydro-N-acetylmuramic acid kinase	0.85	0.92
17	PFLU_RS24785		outer membrane protein assembly factor BamB	0.76	0.92
18	PFLU_RS24475		AmpG family muropeptide MFS transporter	0.78	0.92
19	PFLU_RS02370		glycosyltransferase	no	0.92
20	PFLU_RS14815		lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase	0.47	0.91

Or look for negative cofitness