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  • Top cofit genes for OKGIIK_14425 from Rhodanobacter sp. FW510-T8

    lytT: DNA-binding response regulator
    KEGG: two-component system, LytT family, response regulator AlgR

    Rank Hit Name Description Conserved? Cofitness  
    1 OKGIIK_06140 merD mercuric resistance transcriptional repressor protein MerD no 0.64
    2 OKGIIK_04400 ccmA multidrug ABC transporter ATP-binding protein 0.28 0.61
    3 OKGIIK_08350 hutU urocanate hydratase 0.43 0.61
    4 OKGIIK_04575 Copper resistance protein CopA no 0.58
    5 OKGIIK_00405 tsaA tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO no 0.58
    6 OKGIIK_12790 norM MATE family efflux transporter 0.24 0.57
    7 OKGIIK_11900 trmB tRNA (guanosine(46)-N7)-methyltransferase TrmB 0.60 0.55
    8 OKGIIK_12440 djlA co-chaperone DjlA no 0.53
    9 OKGIIK_11065 ompR two-component system response regulator no 0.53
    10 OKGIIK_11630 apaG Co2+/Mg2+ efflux protein ApaG no 0.53
    11 OKGIIK_10705 cdd cytidine deaminase no 0.52
    12 OKGIIK_09465 argG argininosuccinate synthase 0.57 0.51
    13 OKGIIK_01445 hypothetical protein no 0.51
    14 OKGIIK_08315 3-demethylubiquinone-9 3-methyltransferase no 0.51
    15 OKGIIK_04590 Putative metal-binding protein no 0.50
    16 OKGIIK_05200 TniQ family protein no 0.50
    17 OKGIIK_14710 B12-binding domain-containing radical SAM protein no 0.50
    18 OKGIIK_16595 yqeY glutamyl-tRNA amidotransferase no 0.50
    19 OKGIIK_09665 Hydrolase 0.30 0.49
    20 OKGIIK_09900 SET domain-containing protein no 0.49

    Or look for negative cofitness