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  • Top cofit genes for OKFHMN_17835 from Escherichia coli ECRC100

    sspB: ClpXP protease specificity-enhancing factor
    SEED: ClpXP protease specificity-enhancing factor / Stringent starvation protein B
    KEGG: stringent starvation protein B

    Rank Hit Name Description Conserved? Cofitness  
    1 OKFHMN_18805 tolC outer membrane channel protein TolC 0.81 0.92
    2 OKFHMN_16925 glpD glycerol-3-phosphate dehydrogenase 0.72 0.85
    3 OKFHMN_10045 gmhB D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase no 0.84
    4 OKFHMN_15740 yibN Uncharacterized protein YibN no 0.81
    5 OKFHMN_26470 htpX protease HtpX 0.65 0.81
    6 OKFHMN_27015 hxpB hexitol phosphatase HxpB no 0.81
    7 OKFHMN_06715 galT galactose-1-phosphate uridylyltransferase 0.68 0.80
    8 OKFHMN_15505 fimB integrase no 0.80
    9 OKFHMN_14155 hypothetical protein no 0.79
    10 OKFHMN_12560 adiC arginine/agmatine antiporter no 0.78
    11 OKFHMN_08020 hia adhesin no 0.78
    12 OKFHMN_00835 lysozyme no 0.76
    13 OKFHMN_23700 Bacteriophage protein no 0.76
    14 OKFHMN_01730 hrpA ATP-dependent RNA helicase HrpA 0.71 0.75
    15 OKFHMN_28070 Phage minor tail protein no 0.75
    16 OKFHMN_11920 cybC cytochrome b562 no 0.74
    17 OKFHMN_05420 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM no 0.74
    18 OKFHMN_17685 dusB tRNA dihydrouridine synthase DusB 0.88 0.74
    19 OKFHMN_15665 waaO lipopolysaccharide 3-alpha-galactosyltransferase 0.31 0.74
    20 OKFHMN_25665 fliP flagellar type III secretion system pore protein FliP 0.81 0.74

    Or look for negative cofitness