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Cofit
Protein
Homologs
Top cofit genes for OKFHMN_09385 from
Escherichia coli ECRC100
fimB
:
integrase
SEED: Phage integrase, Phage P4-associated
Rank
Hit
Name
Description
Conserved?
Cofitness
1
OKFHMN
_07675
ybdG
mechanosensitive ion channel YbdG
no
0.75
2
OKFHMN
_16415
prlC
oligopeptidase A
0.46
0.74
3
OKFHMN
_27885
dnaC
DNA replication protein DnaC
no
0.69
4
OKFHMN
_14535
rffT
TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase
no
0.69
5
OKFHMN
_22870
nuoH
NADH-quinone oxidoreductase subunit NuoH
no
0.67
6
OKFHMN
_25995
transcriptional regulator
no
0.67
7
OKFHMN
_01185
ECSE_1600 family autotransporter
no
0.67
8
OKFHMN
_12240
hflC
protease modulator HflC
no
0.67
9
OKFHMN
_09700
pepD
cytosol nonspecific dipeptidase
no
0.67
10
OKFHMN
_16065
fimD
Outer membrane usher protein FimD/PapC
no
0.67
11
OKFHMN
_25195
Ig-like domain-containing protein
no
0.66
12
OKFHMN
_16590
Outer membrane lipoprotein carrier protein LolA
no
0.66
13
OKFHMN
_17970
yrbG
calcium/sodium antiporter
0.48
0.66
14
OKFHMN
_07700
ibeB
Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC
0.39
0.65
15
OKFHMN
_16430
uspA
universal stress protein UspA
no
0.65
16
OKFHMN
_14930
yieH
6-phosphogluconate phosphatase
0.26
0.65
17
OKFHMN
_18075
secG
preprotein translocase subunit SecG
0.27
0.64
18
OKFHMN
_01580
ydcR
Uncharacterized HTH-type transcriptional regulator YdcR
no
0.64
19
OKFHMN
_07565
entB
enterobactin biosynthesis bifunctional isochorismatase/aryl carrier protein EntB
no
0.64
20
OKFHMN
_13565
oxyR
DNA-binding transcriptional regulator OxyR
no
0.64
Or look for
negative cofitness