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  • Top cofit genes for OHPLBJKB_03435 from Escherichia coli HS(pFamp)R (ATCC 700891)

    hypothetical protein
    SEED: Outer membrane protein ImpK/VasF, OmpA/MotB domain
    KEGG: type VI secretion system protein ImpK

    Rank Hit Name Description Conserved? Cofitness  
    1 OHPLBJKB_01815 Response regulator UvrY 0.55 0.45
    2 OHPLBJKB_01237 Formate hydrogenlyase subunit 7 no 0.39
    3 OHPLBJKB_03217 putative cyclic di-GMP phosphodiesterase PdeB no 0.38
    4 OHPLBJKB_00677 Transcriptional regulatory protein QseB no 0.36
    5 OHPLBJKB_01838 Motility protein A 0.47 0.36
    6 OHPLBJKB_02896 Transcriptional regulator MntR no 0.35
    7 OHPLBJKB_00276 hypothetical protein no 0.35
    8 OHPLBJKB_02421 Tryptophan biosynthesis protein TrpCF 0.56 0.35
    9 OHPLBJKB_03541 S-adenosylmethionine decarboxylase proenzyme no 0.34
    10 OHPLBJKB_00451 hypothetical protein no 0.34
    11 OHPLBJKB_03265 Nucleoside-specific channel-forming protein Tsx no 0.34
    12 OHPLBJKB_02895 Inner membrane protein YbiR no 0.34
    13 OHPLBJKB_00882 hypothetical protein no 0.34
    14 OHPLBJKB_04172 Inner membrane metabolite transport protein YgcS no 0.33
    15 OHPLBJKB_03194 Protein UshA no 0.33
    16 OHPLBJKB_02670 Trimethylamine-N-oxide reductase 1 no 0.32
    17 OHPLBJKB_00137 Xylose import ATP-binding protein XylG no 0.32
    18 OHPLBJKB_02406 Aconitate hydratase A no 0.32
    19 OHPLBJKB_00539 Tryptophan-specific transport protein no 0.32
    20 OHPLBJKB_02829 hypothetical protein no 0.32

    Or look for negative cofitness