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Cofit
Protein
Homologs
Top cofit genes for OHPLBJKB_00175 from
Escherichia coli HS(pFamp)R (ATCC 700891)
Protein YhjJ
SEED: Protein YhjJ, putative peptidase
Rank
Hit
Name
Description
Conserved?
Cofitness
1
OHPLBJKB
_01329
Nucleoside permease NupC
no
0.76
2
OHPLBJKB
_00299
Osmolarity sensor protein EnvZ
0.64
0.74
3
OHPLBJKB
_03934
Proline/betaine transporter
no
0.74
4
OHPLBJKB
_03777
DNA polymerase III subunit chi
no
0.73
5
OHPLBJKB
_02711
Lon protease
no
0.73
6
OHPLBJKB
_01640
Uridine kinase
0.66
0.73
7
OHPLBJKB
_04181
GTP-binding protein TypA/BipA
0.53
0.73
8
OHPLBJKB
_02580
Ribosomal large subunit pseudouridine synthase C
0.64
0.72
9
OHPLBJKB
_02101
OriC-binding nucleoid-associated protein
0.43
0.72
10
OHPLBJKB
_03863
Ribonuclease R
0.39
0.71
11
OHPLBJKB
_00555
Ribosomal RNA small subunit methyltransferase I
0.71
0.71
12
OHPLBJKB
_03286
Shikimate kinase 2
no
0.71
13
OHPLBJKB
_04119
ATP-dependent protease subunit HslV
0.75
0.71
14
OHPLBJKB
_02048
Pyruvate kinase I
0.61
0.70
15
OHPLBJKB
_00238
Ribosomal RNA small subunit methyltransferase D
no
0.70
16
OHPLBJKB
_03214
Hemolysin expression-modulating protein Hha
no
0.70
17
OHPLBJKB
_03122
Enterochelin esterase
no
0.69
18
OHPLBJKB
_01659
6-phosphogluconate dehydrogenase, decarboxylating
no
0.69
19
OHPLBJKB
_00820
Flavodoxin 2
no
0.68
20
OHPLBJKB
_02301
hypothetical protein
0.62
0.68
Or look for
negative cofitness