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Cofit
Protein
Homologs
Top cofit genes for OH686_18355 from
Pseudomonas sp. S08-1
Transcriptional regulator, AraC family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
OH686
_08685
Sensor histidine kinase PrrB (RegB)
no
0.59
2
OH686
_23405
Arginine/ornithine ABC transporter, substrate-binding protein AotJ
no
0.56
3
OH686
_14090
Uncharacterized UPF0750 membrane protein
no
0.55
4
OH686
_14675
tRNA (cytidine(34)-2'-O)-methyltransferase
no
0.54
5
OH686
_07295
hypothetical protein
no
0.53
6
OH686
_19100
hypothetical protein
no
0.53
7
OH686
_09975
3-oxoacyl-[ACP] synthase
no
0.53
8
OH686
_12190
Endonuclease/exonuclease/phosphatase family protein
0.18
0.53
9
OH686
_09510
hypothetical protein
no
0.52
10
OH686
_22335
hypothetical protein
no
0.51
11
OH686
_05730
RNA helicase HrpA
no
0.50
12
OH686
_10385
Uncharacterized inner membrane protein RarD
no
0.50
13
OH686
_14190
hypothetical protein
no
0.50
14
OH686
_18625
hypothetical protein
no
0.49
15
OH686
_05645
Sulfate permease
0.15
0.49
16
OH686
_17625
Membrane-bound lytic murein transglycosylase F
no
0.49
17
OH686
_15955
UPF0313 [4Fe-4S] protein YgiQ
0.73
0.48
18
OH686
_08925
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
no
0.48
19
OH686
_12880
LemA protein
no
0.48
20
OH686
_22655
Uncharacterized efflux ABC transporter, ATP-binding protein YadG
0.28
0.48
Or look for
negative cofitness