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  • Top cofit genes for MIT1002_03606 from Alteromonas macleodii MIT1002

    Ribonuclease R
    SEED: 3'-to-5' exoribonuclease RNase R
    KEGG: ribonuclease R

    Rank Hit Name Description Conserved? Cofitness  
    1 MIT1002_01135 Methylmalonyl-CoA carboxyltransferase 5S subunit no 0.88
    2 MIT1002_03327 3-hydroxyisobutyrate dehydrogenase 0.33 0.84
    3 MIT1002_02297 Sporulation inhibitor KipI 0.56 0.82
    4 MIT1002_03692 Poly(A) polymerase I precursor 0.89 0.81
    5 MIT1002_03905 Biosynthetic arginine decarboxylase 0.34 0.80
    6 MIT1002_02030 hypothetical protein no 0.79
    7 MIT1002_01665 Hydroxymethylglutaryl-CoA lyase YngG 0.70 0.79
    8 MIT1002_01553 4-hydroxyphenylpyruvate dioxygenase no 0.79
    9 MIT1002_03507 Acetate transporter ActP no 0.79
    10 MIT1002_03326 Methylmalonate-semialdehyde dehydrogenase [acylating] no 0.79
    11 MIT1002_02494 Hydroxyacylglutathione hydrolase 0.82 0.79
    12 MIT1002_00455 NAD-dependent malic enzyme 0.74 0.78
    13 MIT1002_03109 Saccharopine dehydrogenase no 0.77
    14 MIT1002_00109 Putative reactive intermediate deaminase TdcF 0.80 0.77
    15 MIT1002_01966 extracellular lipase, Pla-1/cef family no 0.77
    16 MIT1002_02031 hypothetical protein 0.31 0.76
    17 MIT1002_01953 Flavin-dependent tryptophan halogenase PrnA no 0.76
    18 MIT1002_02033 efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family 0.30 0.76
    19 MIT1002_02183 Alanine dehydrogenase no 0.75
    20 MIT1002_03505 DNA polymerase III PolC-type no 0.75

    Or look for negative cofitness