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  • Top cofit genes for MIT1002_01190 from Alteromonas macleodii MIT1002

    Sensor histidine kinase YehU
    SEED: Autolysin sensor kinase (EC 2.7.3.-)
    KEGG: two-component system, LytT family, sensor kinase

    Rank Hit Name Description Conserved? Cofitness  
    1 MIT1002_02364 Cyclic di-GMP phosphodiesterase Gmr no 0.72
    2 MIT1002_00603 hypothetical protein 0.45 0.68
    3 MIT1002_00443 hypothetical protein no 0.68
    4 MIT1002_01933 Ribosomal protein S12 methylthiotransferase RimO 0.53 0.66
    5 MIT1002_02216 hypothetical protein no 0.65
    6 MIT1002_01237 Sigma-24 no 0.65
    7 MIT1002_04072 hypothetical protein no 0.64
    8 MIT1002_03334 curli assembly protein CsgF no 0.64
    9 MIT1002_02090 Toluene-4-monooxygenase system protein A no 0.64
    10 MIT1002_01468 Transcript cleavage factor GreA 0.41 0.64
    11 MIT1002_03333 curli production assembly/transport protein CsgG no 0.63
    12 MIT1002_01277 hypothetical protein no 0.63
    13 MIT1002_03337 curlin minor subunit CsgB no 0.63
    14 MIT1002_03332 CsgBAC operon transcriptional regulatory protein no 0.62
    15 MIT1002_03790 DNA mismatch repair protein MutL no 0.62
    16 MIT1002_03336 curlin minor subunit CsgB no 0.62
    17 MIT1002_00162 putative glycosyl transferase no 0.62
    18 MIT1002_03968 Transcriptional regulatory protein OmpR 0.26 0.62
    19 MIT1002_01462 Oxygen sensor protein DosP no 0.62
    20 MIT1002_04189 hypothetical protein no 0.62

    Or look for negative cofitness