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Cofit
Protein
Homologs
Top cofit genes for LU632_RS25440 from
Erwinia tracheiphila SCR3
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS14070
amylovoran biosynthesis protein AmsF
no
0.57
2
LU632
_RS05325
hypothetical protein
no
0.53
3
LU632
_RS18405
LysR substrate-binding domain-containing protein
no
0.51
4
LU632
_RS03210
EscI/YscI/HrpB family type III secretion system inner rod protein
no
0.49
5
LU632
_RS20435
sensor histidine kinase
no
0.46
6
LU632
_RS20440
btsR
two-component system response regulator BtsR
no
0.45
7
LU632
_RS09335
methyl-accepting chemotaxis protein
no
0.44
8
LU632
_RS01280
ulaA
PTS ascorbate transporter subunit IIC
no
0.44
9
LU632
_RS13265
MlaD family protein
no
0.44
10
LU632
_RS11800
DUF935 family protein
no
0.43
11
LU632
_RS11620
DUF333 domain-containing protein
no
0.43
12
LU632
_RS17655
hypothetical protein
no
0.42
13
LU632
_RS21455
csrD
RNase E specificity factor CsrD
no
0.41
14
LU632
_RS03315
MbeD family mobilization/exclusion protein
no
0.41
15
LU632
_RS14435
TrmB family transcriptional regulator
no
0.41
16
LU632
_RS23410
hypothetical protein
no
0.40
17
LU632
_RS04195
hypothetical protein
no
0.40
18
LU632
_RS17665
tssC
type VI secretion system contractile sheath large subunit
no
0.40
19
LU632
_RS16870
tRNA/rRNA methyltransferase
no
0.39
20
LU632
_RS05900
hypothetical protein
no
0.39
Or look for
negative cofitness