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  • Top cofit genes for LU632_RS22765 from Erwinia tracheiphila SCR3

    tauA: taurine ABC transporter substrate-binding protein
    SEED: Taurine-binding periplasmic protein TauA
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 LU632_RS09355 DUF3833 domain-containing protein no 0.44
    2 LU632_RS26040 DUF2213 domain-containing protein no 0.43
    3 LU632_RS19990 DUF3461 family protein no 0.41
    4 LU632_RS26050 DUF1073 domain-containing protein no 0.40
    5 LU632_RS07695 DDE-type integrase/transposase/recombinase no 0.40
    6 LU632_RS02245 hypothetical protein no 0.40
    7 LU632_RS13215 MBL fold metallo-hydrolase no 0.40
    8 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE no 0.40
    9 LU632_RS21600 hypothetical protein no 0.40
    10 LU632_RS15045 hypothetical protein no 0.40
    11 LU632_RS17730 Hcp family type VI secretion system effector 0.20 0.40
    12 LU632_RS04625 hypothetical protein no 0.39
    13 LU632_RS08645 T3SS effector OspC family protein no 0.39
    14 LU632_RS12470 DUF441 domain-containing protein no 0.39
    15 LU632_RS05405 phosphoenolpyruvate hydrolase family protein no 0.39
    16 LU632_RS10050 helD DNA helicase IV no 0.38
    17 LU632_RS01540 replication endonuclease no 0.38
    18 LU632_RS07940 sugar phosphatase no 0.38
    19 LU632_RS15480 hypothetical protein no 0.37
    20 LU632_RS05985 recJ single-stranded-DNA-specific exonuclease RecJ 0.19 0.37

    Or look for negative cofitness