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Cofit
Top cofit genes for LU632_RS20625 from
Erwinia tracheiphila SCR3
DUF1249 family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS20620
cpdA
3',5'-cyclic-AMP phosphodiesterase
no
0.96
2
LU632
_RS21350
DUF1043 family protein
no
0.82
3
LU632
_RS10005
matP
macrodomain Ter protein MatP
no
0.81
4
LU632
_RS03325
hypothetical protein
no
0.79
5
LU632
_RS19580
fabR
HTH-type transcriptional repressor FabR
no
0.77
6
LU632
_RS20100
panB
3-methyl-2-oxobutanoate hydroxymethyltransferase
no
0.76
7
LU632
_RS03330
LacI family DNA-binding transcriptional regulator
no
0.76
8
LU632
_RS21320
glutamate synthase small subunit
no
0.75
9
LU632
_RS21315
gltB
glutamate synthase large subunit
no
0.75
10
LU632
_RS12305
ROK family transcriptional regulator
no
0.75
11
LU632
_RS09905
aspartate/tyrosine/aromatic aminotransferase
no
0.75
12
LU632
_RS06480
rpoS
RNA polymerase sigma factor RpoS
no
0.75
13
LU632
_RS05485
rsmE
16S rRNA (uracil(1498)-N(3))-methyltransferase
no
0.75
14
LU632
_RS08890
gndA
NADP-dependent phosphogluconate dehydrogenase
no
0.74
15
LU632
_RS02735
apaG
Co2+/Mg2+ efflux protein ApaG
no
0.74
16
LU632
_RS08170
rcsC
two-component system sensor histidine kinase RcsC
no
0.74
17
LU632
_RS09740
lrp
leucine-responsive transcriptional regulator Lrp
no
0.74
18
LU632
_RS11425
uspE
universal stress protein UspE
no
0.73
19
LU632
_RS22715
fkpA
FKBP-type peptidyl-prolyl cis-trans isomerase
no
0.72
20
LU632
_RS06625
cysK
cysteine synthase A
no
0.72
Or look for
negative cofitness