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Cofit
Protein
Homologs
Top cofit genes for LU632_RS18905 from
Erwinia tracheiphila SCR3
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS11025
ppsA
phosphoenolpyruvate synthase
no
0.66
2
LU632
_RS17865
pepB
aminopeptidase PepB
no
0.61
3
LU632
_RS01150
dinB
DNA polymerase IV
no
0.61
4
LU632
_RS05925
transcriptional regulator
no
0.59
5
LU632
_RS02555
nadR
multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR
no
0.59
6
LU632
_RS21905
glycosyltransferase
no
0.58
7
LU632
_RS13160
hypothetical protein
no
0.58
8
LU632
_RS12560
DUF2498 family protein
no
0.58
9
LU632
_RS05055
TIGR03757 family integrating conjugative element protein
no
0.56
10
LU632
_RS17710
helix-turn-helix domain-containing protein
no
0.56
11
LU632
_RS17685
tagH
type VI secretion system-associated FHA domain protein TagH
no
0.55
12
LU632
_RS24675
winged helix-turn-helix domain-containing protein
no
0.55
13
LU632
_RS01745
hypothetical protein
no
0.54
14
LU632
_RS08725
PAS domain S-box protein
no
0.54
15
LU632
_RS04165
2-isopropylmalate synthase
no
0.54
16
LU632
_RS06130
hypothetical protein
no
0.54
17
LU632
_RS20300
fimbrial biogenesis outer membrane usher protein
no
0.54
18
LU632
_RS00760
TagK domain-containing protein
no
0.53
19
LU632
_RS20650
ygiD
4,5-DOPA dioxygenase extradiol
no
0.53
20
LU632
_RS16445
pagP
lipid IV(A) palmitoyltransferase PagP
no
0.52
Or look for
negative cofitness