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Cofit
Protein
Homologs
Top cofit genes for LU632_RS12795 from
Erwinia tracheiphila SCR3
YkgJ family cysteine cluster protein
SEED: Ferredoxin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS14680
hypothetical protein
no
0.65
2
LU632
_RS04835
TIGR03758 family integrating conjugative element protein
no
0.63
3
LU632
_RS24500
glycoside hydrolase family 5 protein
no
0.61
4
LU632
_RS01300
L-ribulose-5-phosphate 3-epimerase
no
0.60
5
LU632
_RS00970
thiC
phosphomethylpyrimidine synthase ThiC
no
0.59
6
LU632
_RS13815
NAD(P)-dependent oxidoreductase
no
0.57
7
LU632
_RS16785
mmuP
S-methylmethionine permease
no
0.56
8
LU632
_RS19125
hypothetical protein
no
0.56
9
LU632
_RS20840
DUF445 family protein
no
0.55
10
LU632
_RS09525
ABC-F family ATPase
no
0.55
11
LU632
_RS10930
tyrosine-type recombinase/integrase
no
0.54
12
LU632
_RS04690
IclR family transcriptional regulator
no
0.54
13
LU632
_RS14390
hypothetical protein
no
0.53
14
LU632
_RS04960
four-carbon acid sugar kinase family protein
no
0.53
15
LU632
_RS17990
yfhb
phosphatidylglycerophosphatase C
no
0.52
16
LU632
_RS03655
phage major tail tube protein
no
0.52
17
LU632
_RS14195
bacteriophage antitermination protein Q
no
0.51
18
LU632
_RS23940
IMPACT family protein
no
0.51
19
LU632
_RS25360
traO
conjugal transfer protein TraO
no
0.51
20
LU632
_RS05100
hypothetical protein
no
0.51
Or look for
negative cofitness