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Cofit
Protein
Homologs
Top cofit genes for LU632_RS07520 from
Erwinia tracheiphila SCR3
phage protein D
SEED: Gene D protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS21505
carbonic anhydrase family protein
no
0.60
2
LU632
_RS17990
yfhb
phosphatidylglycerophosphatase C
no
0.55
3
LU632
_RS03635
phage tail protein I
no
0.55
4
LU632
_RS24065
glpT
glycerol-3-phosphate transporter
no
0.54
5
LU632
_RS18980
DUF2076 domain-containing protein
no
0.53
6
LU632
_RS06885
Phage antitermination protein q
no
0.53
7
LU632
_RS23585
transposase
no
0.52
8
LU632
_RS08510
DUF418 family protein
no
0.50
9
LU632
_RS08690
MdtB/MuxB family multidrug efflux RND transporter permease subunit
no
0.49
10
LU632
_RS00500
sctT
type III secretion system export apparatus subunit SctT
no
0.49
11
LU632
_RS15545
phage tail protein
no
0.49
12
LU632
_RS18175
acrR
multidrug efflux transporter transcriptional repressor AcrR
no
0.49
13
LU632
_RS14370
DUF4942 domain-containing protein
no
0.49
14
LU632
_RS14005
transglycosylase SLT domain-containing protein
no
0.49
15
LU632
_RS01520
Dam family site-specific DNA-(adenine-N6)-methyltransferase
no
0.49
16
LU632
_RS20565
DUF1471 domain-containing protein
no
0.48
17
LU632
_RS02345
TIM barrel protein
no
0.48
18
LU632
_RS07730
hypothetical protein
no
0.47
19
LU632
_RS01630
phage tail protein
no
0.47
20
LU632
_RS09365
DUF1365 domain-containing protein
no
0.47
Or look for
negative cofitness