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  • Top cofit genes for LU632_RS06670 from Erwinia tracheiphila SCR3

    GntR family transcriptional regulator
    SEED: Transcriptional regulator, GntR family

    Rank Hit Name Description Conserved? Cofitness  
    1 LU632_RS18970 YaiA family protein no 0.65
    2 LU632_RS10265 mdoC glucans biosynthesis protein MdoC no 0.64
    3 LU632_RS21445 mreC rod shape-determining protein MreC no 0.63
    4 LU632_RS07770 prmB 50S ribosomal protein L3 N(5)-glutamine methyltransferase 0.34 0.60
    5 LU632_RS04710 IS110 family transposase no 0.60
    6 LU632_RS12965 NAD(P)H nitroreductase no 0.60
    7 LU632_RS25010 hypothetical protein no 0.59
    8 LU632_RS19770 amino acid ABC transporter substrate-binding protein no 0.59
    9 LU632_RS07880 TIGR01777 family oxidoreductase 0.17 0.59
    10 LU632_RS06075 lplT lysophospholipid transporter LplT 0.28 0.58
    11 LU632_RS22945 hypothetical protein no 0.57
    12 LU632_RS20530 MFS transporter no 0.57
    13 LU632_RS11790 DUF2313 domain-containing protein no 0.55
    14 LU632_RS08950 hisG ATP phosphoribosyltransferase no 0.54
    15 LU632_RS09455 glnH glutamine ABC transporter substrate-binding protein GlnH no 0.54
    16 LU632_RS22360 exopolysaccharide production protein YjbE no 0.54
    17 LU632_RS04275 L-ribulose-5-phosphate 3-epimerase no 0.54
    18 LU632_RS11145 pykF pyruvate kinase PykF no 0.54
    19 LU632_RS17580 yejF microcin C ABC transporter ATP-binding protein YejF no 0.53
    20 LU632_RS16565 hypothetical protein no 0.53

    Or look for negative cofitness