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Cofit
Protein
Homologs
Top cofit genes for LU632_RS06245 from
Erwinia tracheiphila SCR3
YgdI/YgdR family lipoprotein
SEED: probable lipoprotein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS00945
thiH
2-iminoacetate synthase ThiH
0.45
0.62
2
LU632
_RS06100
hypothetical protein
no
0.59
3
LU632
_RS01145
dpaA
peptidoglycan meso-diaminopimelic acid protein amidase
0.35
0.58
4
LU632
_RS25480
helix-turn-helix domain-containing protein
no
0.55
5
LU632
_RS07030
hypothetical protein
no
0.55
6
LU632
_RS09915
ompC
porin OmpC
no
0.53
7
LU632
_RS13775
D-cysteine desulfhydrase
no
0.53
8
LU632
_RS21170
dacB
serine-type D-Ala-D-Ala carboxypeptidase
no
0.53
9
LU632
_RS06785
IS110 family transposase
no
0.52
10
LU632
_RS21760
DUF2065 domain-containing protein
0.19
0.50
11
LU632
_RS11475
serine protease
no
0.50
12
LU632
_RS15980
hypothetical protein
no
0.50
13
LU632
_RS15815
IS110 family transposase
no
0.49
14
LU632
_RS09165
yvcK
uridine diphosphate-N-acetylglucosamine-binding protein YvcK
no
0.49
15
LU632
_RS21910
hypothetical protein
no
0.49
16
LU632
_RS22935
envZ
two-component system sensor histidine kinase EnvZ
0.38
0.48
17
LU632
_RS02635
mog
molybdopterin adenylyltransferase
no
0.48
18
LU632
_RS04645
glk
glucokinase
no
0.48
19
LU632
_RS00265
ABC transporter substrate-binding protein
no
0.48
20
LU632
_RS10160
cycA
D-serine/D-alanine/glycine transporter
0.46
0.48
Or look for
negative cofitness