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  • Top cofit genes for LU632_RS03250 from Erwinia tracheiphila SCR3

    type III secretion system protein
    SEED: HrpV

    Rank Hit Name Description Conserved? Cofitness  
    1 LU632_RS15700 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase no 0.53
    2 LU632_RS20310 helix-turn-helix transcriptional regulator no 0.52
    3 LU632_RS01260 MurR/RpiR family transcriptional regulator no 0.51
    4 LU632_RS11935 alcohol dehydrogenase catalytic domain-containing protein no 0.50
    5 LU632_RS12165 ttcA tRNA 2-thiocytidine(32) synthetase TtcA no 0.50
    6 LU632_RS01180 hypothetical protein no 0.50
    7 LU632_RS03355 hypothetical protein no 0.50
    8 LU632_RS14805 pabC aminodeoxychorismate lyase no 0.47
    9 LU632_RS21465 msrP protein-methionine-sulfoxide reductase catalytic subunit MsrP no 0.47
    10 LU632_RS03535 DinI family protein no 0.47
    11 LU632_RS20790 tyrosine-type recombinase/integrase no 0.47
    12 LU632_RS00410 hypothetical protein no 0.46
    13 LU632_RS23720 Lrp/AsnC family transcriptional regulator no 0.46
    14 LU632_RS01570 type II toxin-antitoxin system death-on-curing family toxin no 0.46
    15 LU632_RS06585 FlxA-like family protein no 0.46
    16 LU632_RS16895 hypothetical protein no 0.45
    17 LU632_RS19170 gntU gluconate transporter no 0.44
    18 LU632_RS14060 hypothetical protein no 0.43
    19 LU632_RS19395 DHCW motif cupin fold protein no 0.43
    20 LU632_RS19350 hypothetical protein no 0.43

    Or look for negative cofitness