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Cofit
Protein
Homologs
Top cofit genes for LU632_RS03250 from
Erwinia tracheiphila SCR3
type III secretion system protein
SEED: HrpV
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS15700
yqaB
fructose-1-phosphate/6-phosphogluconate phosphatase
no
0.53
2
LU632
_RS20310
helix-turn-helix transcriptional regulator
no
0.52
3
LU632
_RS01260
MurR/RpiR family transcriptional regulator
no
0.51
4
LU632
_RS11935
alcohol dehydrogenase catalytic domain-containing protein
no
0.50
5
LU632
_RS12165
ttcA
tRNA 2-thiocytidine(32) synthetase TtcA
no
0.50
6
LU632
_RS01180
hypothetical protein
no
0.50
7
LU632
_RS03355
hypothetical protein
no
0.50
8
LU632
_RS14805
pabC
aminodeoxychorismate lyase
no
0.47
9
LU632
_RS21465
msrP
protein-methionine-sulfoxide reductase catalytic subunit MsrP
no
0.47
10
LU632
_RS03535
DinI family protein
no
0.47
11
LU632
_RS20790
tyrosine-type recombinase/integrase
no
0.47
12
LU632
_RS00410
hypothetical protein
no
0.46
13
LU632
_RS23720
Lrp/AsnC family transcriptional regulator
no
0.46
14
LU632
_RS01570
type II toxin-antitoxin system death-on-curing family toxin
no
0.46
15
LU632
_RS06585
FlxA-like family protein
no
0.46
16
LU632
_RS16895
hypothetical protein
no
0.45
17
LU632
_RS19170
gntU
gluconate transporter
no
0.44
18
LU632
_RS14060
hypothetical protein
no
0.43
19
LU632
_RS19395
DHCW motif cupin fold protein
no
0.43
20
LU632
_RS19350
hypothetical protein
no
0.43
Or look for
negative cofitness