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  • Top cofit genes for LU632_RS02190 from Erwinia tracheiphila SCR3

    DgaE family pyridoxal phosphate-dependent ammonia lyase
    SEED: D-Glucosaminate-6-phosphate ammonia-lyase (EC 4.3.1.-)
    KEGG: L-seryl-tRNA(Ser) seleniumtransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 LU632_RS11545 pspD phage shock protein PspD no 0.70
    2 LU632_RS25080 hypothetical protein no 0.61
    3 LU632_RS16695 DUF4060 family protein no 0.59
    4 LU632_RS24980 helix-turn-helix domain-containing protein no 0.56
    5 LU632_RS22500 DNA adenine methylase no 0.56
    6 LU632_RS12155 IS5/IS1182 family transposase no 0.56
    7 LU632_RS11145 pykF pyruvate kinase PykF no 0.56
    8 LU632_RS14860 rne ribonuclease E no 0.56
    9 LU632_RS25770 relaxosome protein TraM no 0.55
    10 LU632_RS11230 N-ethylmaleimide reductase no 0.55
    11 LU632_RS10320 solA N-methyl-L-tryptophan oxidase no 0.55
    12 LU632_RS02860 hypothetical protein no 0.54
    13 LU632_RS08525 mglA galactose/methyl galactoside ABC transporter ATP-binding protein MglA 0.35 0.54
    14 LU632_RS12635 FMN-dependent NADH-azoreductase 0.67 0.52
    15 LU632_RS03025 hofC protein transport protein HofC no 0.52
    16 LU632_RS02335 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG no 0.52
    17 LU632_RS05130 TIGR03750 family conjugal transfer protein no 0.52
    18 LU632_RS13730 FTR1 family protein no 0.51
    19 LU632_RS06355 hypothetical protein no 0.51
    20 LU632_RS10455 lytic polysaccharide monooxygenase no 0.51

    Or look for negative cofitness