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  • Top cofit genes for LU632_RS02090 from Erwinia tracheiphila SCR3

    YtfJ family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 LU632_RS18300 winged helix-turn-helix transcriptional regulator no 0.54
    2 LU632_RS21375 DUF1471 domain-containing protein no 0.53
    3 LU632_RS10280 YceK/YidQ family lipoprotein no 0.50
    4 LU632_RS22925 hslO Hsp33 family molecular chaperone HslO no 0.49
    5 LU632_RS15790 N-acetylmuramoyl-L-alanine amidase no 0.46
    6 LU632_RS15120 DUF2800 domain-containing protein no 0.46
    7 LU632_RS12785 CesT family type III secretion system chaperone no 0.44
    8 LU632_RS00725 tssJ type VI secretion system lipoprotein TssJ no 0.44
    9 LU632_RS07500 phage tail protein I no 0.44
    10 LU632_RS02350 CoA-acylating methylmalonate-semialdehyde dehydrogenase no 0.44
    11 LU632_RS19020 MarC family NAAT transporter no 0.42
    12 LU632_RS09385 MerR family transcriptional regulator no 0.42
    13 LU632_RS17865 pepB aminopeptidase PepB no 0.41
    14 LU632_RS11295 GMC oxidoreductase no 0.41
    15 LU632_RS07385 recombinase family protein no 0.41
    16 LU632_RS05445 hemW radical SAM family heme chaperone HemW no 0.41
    17 LU632_RS24100 pldA phospholipase A no 0.40
    18 LU632_RS04540 recombinase family protein no 0.40
    19 LU632_RS03265 avirulence protein no 0.40
    20 LU632_RS06265 rlmM 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM no 0.40

    Or look for negative cofitness