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Cofit
Top cofit genes for LU632_RS02090 from
Erwinia tracheiphila SCR3
YtfJ family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS18300
winged helix-turn-helix transcriptional regulator
no
0.54
2
LU632
_RS21375
DUF1471 domain-containing protein
no
0.53
3
LU632
_RS10280
YceK/YidQ family lipoprotein
no
0.50
4
LU632
_RS22925
hslO
Hsp33 family molecular chaperone HslO
no
0.49
5
LU632
_RS15790
N-acetylmuramoyl-L-alanine amidase
no
0.46
6
LU632
_RS15120
DUF2800 domain-containing protein
no
0.46
7
LU632
_RS12785
CesT family type III secretion system chaperone
no
0.44
8
LU632
_RS00725
tssJ
type VI secretion system lipoprotein TssJ
no
0.44
9
LU632
_RS07500
phage tail protein I
no
0.44
10
LU632
_RS02350
CoA-acylating methylmalonate-semialdehyde dehydrogenase
no
0.44
11
LU632
_RS19020
MarC family NAAT transporter
no
0.42
12
LU632
_RS09385
MerR family transcriptional regulator
no
0.42
13
LU632
_RS17865
pepB
aminopeptidase PepB
no
0.41
14
LU632
_RS11295
GMC oxidoreductase
no
0.41
15
LU632
_RS07385
recombinase family protein
no
0.41
16
LU632
_RS05445
hemW
radical SAM family heme chaperone HemW
no
0.41
17
LU632
_RS24100
pldA
phospholipase A
no
0.40
18
LU632
_RS04540
recombinase family protein
no
0.40
19
LU632
_RS03265
avirulence protein
no
0.40
20
LU632
_RS06265
rlmM
23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM
no
0.40
Or look for
negative cofitness