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  • Top cofit genes for LU632_RS01690 from Erwinia tracheiphila SCR3

    phage major tail tube protein
    SEED: Phage major tail tube protein

    Rank Hit Name Description Conserved? Cofitness  
    1 LU632_RS10515 fliR flagellar type III secretion system protein FliR no 0.51
    2 LU632_RS01170 crl sigma factor-binding protein Crl no 0.48
    3 LU632_RS23355 EAL domain-containing protein no 0.47
    4 LU632_RS07635 hypothetical protein no 0.46
    5 LU632_RS21415 aaeR HTH-type transcriptional activator AaeR no 0.45
    6 LU632_RS06150 TauD/TfdA family dioxygenase no 0.45
    7 LU632_RS14535 DUF551 domain-containing protein no 0.45
    8 LU632_RS01300 L-ribulose-5-phosphate 3-epimerase no 0.44
    9 LU632_RS06110 ptsP phosphoenolpyruvate--protein phosphotransferase 0.32 0.43
    10 LU632_RS14450 DNA cytosine methyltransferase no 0.43
    11 LU632_RS20145 YacC family pilotin-like protein no 0.42
    12 LU632_RS06155 SDR family oxidoreductase no 0.42
    13 LU632_RS13960 peroxiredoxin no 0.42
    14 LU632_RS15135 YfdQ family protein no 0.42
    15 LU632_RS00710 tssB type VI secretion system contractile sheath small subunit no 0.41
    16 LU632_RS22170 fabY fatty acid biosynthesis protein FabY no 0.41
    17 LU632_RS05400 Tm-1-like ATP-binding domain-containing protein no 0.41
    18 LU632_RS01985 ShlB/FhaC/HecB family hemolysin secretion/activation protein no 0.40
    19 LU632_RS20885 hypothetical protein no 0.40
    20 LU632_RS22160 virulence factor BrkB family protein no 0.40

    Or look for negative cofitness