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Cofit
Top cofit genes for LU632_RS01180 from
Erwinia tracheiphila SCR3
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LU632
_RS13305
DNA polymerase III subunit theta
no
0.65
2
LU632
_RS21625
IS6 family transposase
no
0.64
3
LU632
_RS25630
pilM
type IV pilus biogenesis protein PilM
no
0.61
4
LU632
_RS23190
IS6 family transposase
no
0.61
5
LU632
_RS24235
wecC
UDP-N-acetyl-D-mannosamine dehydrogenase
no
0.61
6
LU632
_RS00525
IpaD/SipD/SspD family type III secretion system needle tip protein
no
0.59
7
LU632
_RS18270
amtB
ammonium transporter AmtB
no
0.59
8
LU632
_RS17320
fruK
1-phosphofructokinase
no
0.59
9
LU632
_RS18175
acrR
multidrug efflux transporter transcriptional repressor AcrR
no
0.59
10
LU632
_RS25060
lysozyme
no
0.58
11
LU632
_RS21420
tldD
metalloprotease TldD
no
0.58
12
LU632
_RS25045
hypothetical protein
no
0.58
13
LU632
_RS03175
sctV
type III secretion system export apparatus subunit SctV
no
0.58
14
LU632
_RS05980
dsbC
bifunctional protein-disulfide isomerase/oxidoreductase DsbC
no
0.57
15
LU632
_RS10355
DUF480 domain-containing protein
no
0.57
16
LU632
_RS24205
rffM
lipopolysaccharide N-acetylmannosaminouronosyltransferase
no
0.57
17
LU632
_RS24225
rffA
dTDP-4-amino-4,6-dideoxygalactose transaminase
no
0.56
18
LU632
_RS09215
rhlE
ATP-dependent RNA helicase RhlE
no
0.56
19
LU632
_RS02385
iolE
myo-inosose-2 dehydratase
no
0.56
20
LU632
_RS05320
hypothetical protein
no
0.56
Or look for
negative cofitness