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  • Top cofit genes for LRK53_RS18685 from Rhodanobacter sp000427505 FW510-R12

    error-prone DNA polymerase
    SEED: DNA polymerase III alpha subunit (EC 2.7.7.7)
    KEGG: error-prone DNA polymerase

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS04950 carbohydrate kinase no 0.43
    2 LRK53_RS12335 carboxymuconolactone decarboxylase family protein no 0.39
    3 LRK53_RS10365 site-specific integrase no 0.38
    4 LRK53_RS16440 enoyl-CoA hydratase-related protein no 0.38
    5 LRK53_RS16730 nucleoside hydrolase no 0.38
    6 LRK53_RS16375 3-isopropylmalate dehydratase large subunit no 0.38
    7 LRK53_RS00195 type II glyceraldehyde-3-phosphate dehydrogenase no 0.37
    8 LRK53_RS12965 cupin domain-containing protein no 0.37
    9 LRK53_RS09395 PAS-domain containing protein no 0.36
    10 LRK53_RS18250 conjugative transfer system coupling protein TraD 0.39 0.36
    11 LRK53_RS00450 hypothetical protein no 0.36
    12 LRK53_RS01930 NAD(+) diphosphatase no 0.34
    13 LRK53_RS10990 hypothetical protein no 0.34
    14 LRK53_RS11935 CYTH domain-containing protein no 0.34
    15 LRK53_RS00470 GNAT family N-acetyltransferase no 0.33
    16 LRK53_RS07865 EAL domain-containing protein no 0.33
    17 LRK53_RS11070 MBL fold metallo-hydrolase no 0.33
    18 LRK53_RS05730 twitching motility response regulator PilG no 0.33
    19 LRK53_RS05805 hypothetical protein no 0.33
    20 LRK53_RS02785 ATP-dependent helicase HrpB no 0.33

    Or look for negative cofitness