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  • Top cofit genes for LRK53_RS16645 from Rhodanobacter sp000427505 FW510-R12

    MarR family transcriptional regulator
    SEED: Transcriptional regulator, MarR family

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS09080 tRNA pseudouridine(55) synthase TruB no 0.56
    2 LRK53_RS04660 TonB-dependent receptor no 0.53
    3 LRK53_RS16400 DUF1329 domain-containing protein no 0.52
    4 LRK53_RS02735 type II secretion system inner membrane protein GspF 0.48 0.52
    5 LRK53_RS02745 GspH/FimT family pseudopilin no 0.50
    6 LRK53_RS07335 hypothetical protein no 0.49
    7 LRK53_RS02780 type II secretion system secretin GspD no 0.48
    8 LRK53_RS13450 FKBP-type peptidyl-prolyl cis-trans isomerase no 0.48
    9 LRK53_RS10505 MBL fold metallo-hydrolase no 0.46
    10 LRK53_RS15250 membrane assembly protein AsmA no 0.46
    11 LRK53_RS02770 type II secretion system protein GspM no 0.45
    12 LRK53_RS09090 polyribonucleotide nucleotidyltransferase no 0.45
    13 LRK53_RS10570 hypothetical protein no 0.44
    14 LRK53_RS02730 type II secretion system ATPase GspE no 0.43
    15 LRK53_RS02245 MMPL family transporter no 0.43
    16 LRK53_RS16425 CoA transferase 0.29 0.43
    17 LRK53_RS02760 type II secretion system protein GspK no 0.42
    18 LRK53_RS16770 outer membrane lipid asymmetry maintenance protein MlaD 0.52 0.42
    19 LRK53_RS17700 hypothetical protein no 0.42
    20 LRK53_RS16775 lipid asymmetry maintenance ABC transporter permease subunit MlaE no 0.42

    Or look for negative cofitness