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  • Top cofit genes for LRK53_RS16460 from Rhodanobacter sp000427505 FW510-R12

    GGDEF domain-containing protein
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS06535 ATP-binding protein no 0.53
    2 LRK53_RS08325 hypothetical protein no 0.49
    3 LRK53_RS12770 ribonuclease D no 0.49
    4 LRK53_RS08825 recombination mediator RecR no 0.46
    5 LRK53_RS15230 hypothetical protein no 0.46
    6 LRK53_RS15180 chemotaxis protein no 0.44
    7 LRK53_RS00805 LacI family DNA-binding transcriptional regulator no 0.43
    8 LRK53_RS02950 YbaY family lipoprotein no 0.43
    9 LRK53_RS15715 HPr(Ser) kinase/phosphatase no 0.42
    10 LRK53_RS18595 GtrA family protein no 0.42
    11 LRK53_RS17130 energy transducer TonB no 0.42
    12 LRK53_RS14095 polyketide cyclase no 0.42
    13 LRK53_RS09655 ribonuclease R no 0.42
    14 LRK53_RS00025 tetratricopeptide repeat protein no 0.41
    15 LRK53_RS08650 restriction endonuclease subunit S no 0.41
    16 LRK53_RS05510 ABC transporter permease no 0.40
    17 LRK53_RS04230 UPF0104 family protein no 0.40
    18 LRK53_RS05065 NAD(P)-dependent alcohol dehydrogenase no 0.40
    19 LRK53_RS05805 hypothetical protein no 0.40
    20 LRK53_RS16675 DUF58 domain-containing protein no 0.40

    Or look for negative cofitness