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Cofit
Protein
Homologs
Top cofit genes for LRK53_RS16085 from
Rhodanobacter sp000427505 FW510-R12
HNH endonuclease
SEED: HNH endonuclease family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
LRK53
_RS05085
TonB-dependent receptor
no
0.54
2
LRK53
_RS09350
LysR family transcriptional regulator
no
0.47
3
LRK53
_RS01780
sodium-translocating pyrophosphatase
0.41
0.47
4
LRK53
_RS16320
uracil-DNA glycosylase family protein
no
0.44
5
LRK53
_RS01400
fimbrial protein
no
0.43
6
LRK53
_RS12175
sulfate ABC transporter permease subunit CysT
no
0.41
7
LRK53
_RS04985
ABC transporter permease
no
0.39
8
LRK53
_RS13015
alkylphosphonate utilization protein
no
0.39
9
LRK53
_RS06800
FAD-binding oxidoreductase
0.59
0.39
10
LRK53
_RS16015
stage II sporulation protein M
0.44
0.39
11
LRK53
_RS00305
TorF family putative porin
no
0.38
12
LRK53
_RS18300
hypothetical protein
no
0.37
13
LRK53
_RS13040
hypothetical protein
no
0.37
14
LRK53
_RS00240
DUF3820 family protein
0.27
0.36
15
LRK53
_RS16065
DUF4105 domain-containing protein
no
0.36
16
LRK53
_RS15340
phosphotransferase
no
0.35
17
LRK53
_RS01820
VOC family protein
no
0.35
18
LRK53
_RS13930
RNA polymerase sigma factor
no
0.35
19
LRK53
_RS01805
LON peptidase substrate-binding domain-containing protein
no
0.35
20
LRK53
_RS16005
DUF4350 domain-containing protein
0.35
0.34
Or look for
negative cofitness