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  • Top cofit genes for LRK53_RS14910 from Rhodanobacter sp000427505 FW510-R12

    chemoreceptor glutamine deamidase CheD
    SEED: Chemotaxis protein CheD
    KEGG: chemotaxis protein CheD

    Rank Hit Name Description Conserved? Cofitness  
    1 LRK53_RS11395 heat-inducible transcriptional repressor HrcA 0.36 0.49
    2 LRK53_RS03345 DPP IV N-terminal domain-containing protein no 0.45
    3 LRK53_RS06825 ABC transporter ATP-binding protein no 0.43
    4 LRK53_RS04390 glycosyltransferase family 2 protein no 0.42
    5 LRK53_RS18085 phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) no 0.42
    6 LRK53_RS01745 TetR/AcrR family transcriptional regulator 0.37 0.42
    7 LRK53_RS02440 TonB-dependent receptor no 0.42
    8 LRK53_RS05010 beta-phosphoglucomutase no 0.41
    9 LRK53_RS02895 O-antigen ligase family protein no 0.40
    10 LRK53_RS01185 GAF domain-containing protein 0.24 0.40
    11 LRK53_RS02675 NADP-dependent isocitrate dehydrogenase no 0.40
    12 LRK53_RS02535 DUF481 domain-containing protein no 0.40
    13 LRK53_RS06980 hypothetical protein no 0.40
    14 LRK53_RS17550 hypothetical protein no 0.39
    15 LRK53_RS13635 recombination regulator RecX 0.35 0.39
    16 LRK53_RS16605 large-conductance mechanosensitive channel protein MscL no 0.39
    17 LRK53_RS02275 YdcF family protein no 0.38
    18 LRK53_RS13165 alkyl hydroperoxide reductase no 0.37
    19 LRK53_RS19070 hypothetical protein no 0.37
    20 LRK53_RS12485 hypothetical protein no 0.37

    Or look for negative cofitness